30 Mar 2010JobID: TLSMD7784_zxWfiZTDTLSMD Version 1.4.1

1KP8: Chain C TLS Analysis


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Chain C Optimization Residual
1KP8_CHAINC_RESID

TLSMD selects the optimal partition of a chain into 1 to 20 TLS groups by minimizing an overall residual function. This plot shows the value of the residual as a function of the number of TLS groups allowed in the partition. Adding additional TLS groups will always make this residual lower, but there is an issue of diminishing returns as you go to larger numbers of groups. The individual TLS segments are analyzed below.

TLS Partition Segment Alignment of Chain C

# of TLS
Groups
Segment/Sequence Alignment

Sequence Alignment Plot

This plot shows the location along the protein sequence of the optimal TLS group segments, and how those segments align with the optimal TLS group segments as the number of TLS groups used increases.


Summary of Optimal TLS Group Partition using 1 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS1_BMEAN
Analysis of TLS Group 1 Chain Segments (overall rmsd_b=13.67 and residual=15.73)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-5265253855 81.540.131.0013.72-113.3 0.00, 0.50, 3.47 81.50.57


Summary of Optimal TLS Group Partition using 2 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS2_BMEAN
Analysis of TLS Group 2 Chain Segments (overall rmsd_b=10.78 and residual=9.79)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1921911367 57.325.671.00 7.89 33.0 3.18, 0.00, 0.65 57.30.60
green193-5263342488 94.740.461.0014.06-80.7 3.34, 0.00, 0.51 94.70.61


Summary of Optimal TLS Group Partition using 3 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS3_BMEAN
Analysis of TLS Group 3 Chain Segments (overall rmsd_b=6.83 and residual=3.93)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-133132951 42.310.611.00 6.94 32.9 4.32, 1.44, 0.00 42.30.82
green134-3712381784119.619.921.00 7.45109.8 6.23, 0.00, 0.08119.60.82
magenta372-5261551120 53.920.911.00 7.11 32.6 4.67, 0.00, 1.71 53.90.69


Summary of Optimal TLS Group Partition using 4 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS4_BMEAN
Analysis of TLS Group 4 Chain Segments (overall rmsd_b=6.12 and residual=3.16)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-128127911 41.510.081.00 7.01 32.5 3.98, 1.48, 0.00 41.50.83
green129-20375552 92.617.631.00 5.90 40.4 5.88, 1.31, 0.00 92.60.80
magenta204-3681651251129.810.671.00 5.07115.5 5.01, 1.55, 0.00129.80.92
red369-5261581141 54.921.931.00 7.17 32.2 4.90, 0.00, 1.75 54.90.68


Summary of Optimal TLS Group Partition using 5 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS5_BMEAN
Analysis of TLS Group 5 Chain Segments (overall rmsd_b=5.52 and residual=2.56)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-128127911 41.510.081.00 7.01 32.5 3.98, 1.48, 0.00 41.50.83
green129-20375552 92.617.631.00 5.90 40.4 5.88, 1.31, 0.00 92.60.80
magenta204-3681651251129.810.671.00 5.07115.5 5.01, 1.55, 0.00129.80.92
red369-41446323 82.320.001.00 5.53 78.1 0.00, 4.72, 0.00 82.30.75
cyan415-526112818 44.1 9.991.00 5.56 30.3 5.93, 0.00, 2.03 44.10.80


Summary of Optimal TLS Group Partition using 6 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS6_BMEAN
Analysis of TLS Group 6 Chain Segments (overall rmsd_b=5.10 and residual=2.19)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-7271524 41.110.481.00 5.90 33.810.96, 0.00, 0.00 41.10.81
green73-15078543 50.215.971.00 5.02 31.4 9.73, 4.40, 0.00 50.20.70
magenta151-20353396101.411.171.00 5.17 86.5 6.17, 3.03, 0.08101.40.89
red204-3681651251129.810.671.00 5.07115.5 5.01, 1.55, 0.00129.80.92
cyan369-41446323 82.320.001.00 5.53 78.1 0.00, 4.72, 0.00 82.30.75
yellow415-526112818 44.1 9.991.00 5.56 30.3 5.93, 0.00, 2.03 44.10.80


Summary of Optimal TLS Group Partition using 7 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS7_BMEAN
Analysis of TLS Group 7 Chain Segments (overall rmsd_b=4.75 and residual=1.90)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-7271524 41.110.481.00 5.90 33.810.96, 0.00, 0.00 41.10.81
green73-15078543 50.215.971.00 5.02 31.4 9.73, 4.40, 0.00 50.20.70
magenta151-20353396101.411.171.00 5.17 86.5 6.17, 3.03, 0.08101.40.89
red204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
cyan302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
yellow368-41447334 83.520.641.00 5.56 78.4 4.82, 0.00, 0.00 83.50.74
violet415-526112818 44.1 9.991.00 5.56 30.3 5.93, 0.00, 2.03 44.10.80


Summary of Optimal TLS Group Partition using 8 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS8_BMEAN
Analysis of TLS Group 8 Chain Segments (overall rmsd_b=4.56 and residual=1.75)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-7271524 41.110.481.00 5.90 33.810.96, 0.00, 0.00 41.10.81
green73-15078543 50.215.971.00 5.02 31.4 9.73, 4.40, 0.00 50.20.70
magenta151-20353396101.411.171.00 5.17 86.5 6.17, 3.03, 0.08101.40.89
red204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
cyan302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
yellow368-41447334 83.520.641.00 5.56 78.4 4.82, 0.00, 0.00 83.50.74
violet415-48268489 44.2 8.511.00 5.01 33.2 9.41, 0.00, 2.49 44.20.83
purpleblue483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 9 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS9_BMEAN
Analysis of TLS Group 9 Chain Segments (overall rmsd_b=4.37 and residual=1.61)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-7271524 41.110.481.00 5.90 33.810.96, 0.00, 0.00 41.10.81
green73-14977535 49.815.781.00 4.88 31.9 9.34, 4.32, 0.00 49.80.70
magenta150-17728199 91.2 7.091.00 4.21 83.611.65, 0.00, 0.00 91.20.92
red178-20326205110.2 6.341.00 2.76102.9 6.12, 0.00, 0.60110.20.94
cyan204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
yellow302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
violet368-41447334 83.520.641.00 5.56 78.4 4.82, 0.00, 0.00 83.50.74
purpleblue415-48268489 44.2 8.511.00 5.01 33.2 9.41, 0.00, 2.49 44.20.83
salmon483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 10 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS10_BMEAN
Analysis of TLS Group 10 Chain Segments (overall rmsd_b=4.20 and residual=1.49)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-14977535 49.815.781.00 4.88 31.9 9.34, 4.32, 0.00 49.80.70
red150-17728199 91.2 7.091.00 4.21 83.611.65, 0.00, 0.00 91.20.92
cyan178-20326205110.2 6.341.00 2.76102.9 6.12, 0.00, 0.60110.20.94
yellow204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
violet302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
purpleblue368-41447334 83.520.641.00 5.56 78.4 4.82, 0.00, 0.00 83.50.74
salmon415-48268489 44.2 8.511.00 5.01 33.2 9.41, 0.00, 2.49 44.20.83
lime483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 11 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS11_BMEAN
Analysis of TLS Group 11 Chain Segments (overall rmsd_b=4.03 and residual=1.37)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-14977535 49.815.781.00 4.88 31.9 9.34, 4.32, 0.00 49.80.70
red150-17728199 91.2 7.091.00 4.21 83.611.65, 0.00, 0.00 91.20.92
cyan178-20326205110.2 6.341.00 2.76102.9 6.12, 0.00, 0.60110.20.94
yellow204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
violet302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
purpleblue368-39831226 95.7 9.531.00 4.42 69.5 4.26, 1.05, 0.00 95.70.90
salmon399-44446321 48.511.561.00 4.73 35.912.55, 1.81, 0.00 48.50.78
lime445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
slate483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 12 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS12_BMEAN
Analysis of TLS Group 12 Chain Segments (overall rmsd_b=3.88 and residual=1.26)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-14977535 49.815.781.00 4.88 31.9 9.34, 4.32, 0.00 49.80.70
red150-17728199 91.2 7.091.00 4.21 83.611.65, 0.00, 0.00 91.20.92
cyan178-20326205110.2 6.341.00 2.76102.9 6.12, 0.00, 0.60110.20.94
yellow204-30198726129.511.181.00 4.39107.1 0.00, 2.28, 1.46129.50.90
violet302-36766514130.5 9.841.00 3.33102.3 3.54, 0.81, 0.00130.50.91
purpleblue368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
salmon390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
lime414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
slate445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
bluegreen483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 13 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS13_BMEAN
Analysis of TLS Group 13 Chain Segments (overall rmsd_b=3.74 and residual=1.18)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-15078543 50.215.971.00 5.02 31.4 9.73, 4.40, 0.00 50.20.70
red151-18333231 94.6 8.581.00 4.23 83.6 0.00, 7.95, 3.97 94.60.91
cyan184-20926217114.8 9.531.00 2.89110.6 0.00, 6.80, 0.00114.80.90
yellow210-27364475135.2 8.601.00 4.14120.0 3.44, 0.90, 0.00135.20.93
violet274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
purpleblue300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
salmon368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
lime390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
slate414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
bluegreen445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
hotpink483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 14 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS14_BMEAN
Analysis of TLS Group 14 Chain Segments (overall rmsd_b=3.61 and residual=1.09)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-14977535 49.815.781.00 4.88 31.9 9.34, 4.32, 0.00 49.80.70
red150-17728199 91.2 7.091.00 4.21 83.611.65, 0.00, 0.00 91.20.92
cyan178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
yellow203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
violet227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
purpleblue274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
salmon300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
lime368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
slate390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
bluegreen414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
hotpink445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
orange483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 15 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS15_BMEAN
Analysis of TLS Group 15 Chain Segments (overall rmsd_b=3.48 and residual=1.02)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-11745309 41.6 9.611.00 3.86 32.4 7.59, 4.78, 0.00 41.60.79
red118-15033234 61.515.631.00 4.92 26.520.35, 2.02, 0.00 61.50.73
cyan151-17727191 91.9 6.431.00 3.97 83.9 9.23, 0.00, 1.88 91.90.93
yellow178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
violet203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
purpleblue227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
salmon274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
lime300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
slate368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
bluegreen390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
hotpink414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
orange445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
yellowgreen483-52644329 43.911.851.00 4.44 31.311.23, 0.00, 1.46 43.90.77


Summary of Optimal TLS Group Partition using 16 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS16_BMEAN
Analysis of TLS Group 16 Chain Segments (overall rmsd_b=3.37 and residual=0.96)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1716115 41.3 7.121.00 4.56 36.4 0.00, 19.97, 0.00 41.30.85
green18-7255409 41.111.251.00 5.14 31.310.83, 1.65, 0.00 41.10.77
magenta73-11745309 41.6 9.611.00 3.86 32.4 7.59, 4.78, 0.00 41.60.79
red118-15033234 61.515.631.00 4.92 26.520.35, 2.02, 0.00 61.50.73
cyan151-17727191 91.9 6.431.00 3.97 83.9 9.23, 0.00, 1.88 91.90.93
yellow178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
violet203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
purpleblue227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
salmon274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
lime300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
slate368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
bluegreen390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
hotpink414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
orange445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
yellowgreen483-51331230 42.9 8.671.00 3.30 35.4 7.55, 0.00, 0.50 42.90.79
blueviolet514-5261399 46.316.861.00 3.21 29.127.63, 10.36, 0.00 46.30.66


Summary of Optimal TLS Group Partition using 17 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS17_BMEAN
Analysis of TLS Group 17 Chain Segments (overall rmsd_b=3.26 and residual=0.89)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1817126 41.9 7.771.00 4.72 36.9 0.00, 21.62, 0.00 41.90.84
green19-5335248 40.212.351.00 3.77 31.1 8.87, 0.00, 4.93 40.20.72
magenta54-7825195 43.2 8.501.00 3.81 31.425.48, 3.70, 0.00 43.20.83
red79-12850342 41.3 9.691.00 4.11 30.2 0.00, 5.98, 9.19 41.30.79
cyan129-15022156 70.3 9.661.00 3.82 57.118.09, 0.00, 3.49 70.30.85
yellow151-17727191 91.9 6.431.00 3.97 83.9 9.23, 0.00, 1.88 91.90.93
violet178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
purpleblue203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
salmon227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
lime274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
slate300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
bluegreen368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
hotpink390-41324180 71.017.781.00 3.67 65.518.68, 0.00, 0.00 71.00.75
orange414-44431217 43.6 7.581.00 3.85 35.414.98, 0.00, 1.37 43.60.84
yellowgreen445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
blueviolet483-51331230 42.9 8.671.00 3.30 35.4 7.55, 0.00, 0.50 42.90.79
marine514-5261399 46.316.861.00 3.21 29.127.63, 10.36, 0.00 46.30.66


Summary of Optimal TLS Group Partition using 18 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS18_BMEAN
Analysis of TLS Group 18 Chain Segments (overall rmsd_b=3.15 and residual=0.84)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1817126 41.9 7.771.00 4.72 36.9 0.00, 21.62, 0.00 41.90.84
green19-5335248 40.212.351.00 3.77 31.1 8.87, 0.00, 4.93 40.20.72
magenta54-7825195 43.2 8.501.00 3.81 31.425.48, 3.70, 0.00 43.20.83
red79-12850342 41.3 9.691.00 4.11 30.2 0.00, 5.98, 9.19 41.30.79
cyan129-15022156 70.3 9.661.00 3.82 57.118.09, 0.00, 3.49 70.30.85
yellow151-17727191 91.9 6.431.00 3.97 83.9 9.23, 0.00, 1.88 91.90.93
violet178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
purpleblue203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
salmon227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
lime274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
slate300-36768529130.5 9.711.00 3.32105.1 3.63, 0.91, 0.04130.50.91
bluegreen368-38922150 99.8 6.951.00 2.34 90.5 5.48, 0.00, 0.87 99.80.93
hotpink390-40819148 76.913.371.00 3.19 53.824.05, 3.63, 0.00 76.90.83
orange409-4231595 42.6 4.831.00 1.59 21.5 6.59, 0.00, 1.17 42.60.88
yellowgreen424-44421154 44.2 8.491.00 2.53 33.5 1.29, 13.52, 9.65 44.20.82
blueviolet445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
marine483-51331230 42.9 8.671.00 3.30 35.4 7.55, 0.00, 0.50 42.90.79
olive514-5261399 46.316.861.00 3.21 29.127.63, 10.36, 0.00 46.30.66


Summary of Optimal TLS Group Partition using 19 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS19_BMEAN
Analysis of TLS Group 19 Chain Segments (overall rmsd_b=3.04 and residual=0.78)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1817126 41.9 7.771.00 4.72 36.9 0.00, 21.62, 0.00 41.90.84
green19-5335248 40.212.351.00 3.77 31.1 8.87, 0.00, 4.93 40.20.72
magenta54-7825195 43.2 8.501.00 3.81 31.425.48, 3.70, 0.00 43.20.83
red79-12850342 41.3 9.691.00 4.11 30.2 0.00, 5.98, 9.19 41.30.79
cyan129-15022156 70.3 9.661.00 3.82 57.118.09, 0.00, 3.49 70.30.85
yellow151-17727191 91.9 6.431.00 3.97 83.9 9.23, 0.00, 1.88 91.90.93
violet178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
purpleblue203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
salmon227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
lime274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
slate300-34849365127.6 9.531.00 2.55 97.0 5.38, 0.00, 1.07127.60.91
bluegreen349-36416138139.2 4.101.00 1.44138.7 0.00, 0.00, 0.00139.20.96
hotpink365-38925176103.511.081.00 2.76 91.5 6.87, 0.00, 1.10103.50.90
orange390-40819148 76.913.371.00 3.19 53.824.05, 3.63, 0.00 76.90.83
yellowgreen409-4231595 42.6 4.831.00 1.59 21.5 6.59, 0.00, 1.17 42.60.88
blueviolet424-44421154 44.2 8.491.00 2.53 33.5 1.29, 13.52, 9.65 44.20.82
marine445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
olive483-51331230 42.9 8.671.00 3.30 35.4 7.55, 0.00, 0.50 42.90.79
purple514-5261399 46.316.861.00 3.21 29.127.63, 10.36, 0.00 46.30.66


Summary of Optimal TLS Group Partition using 20 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1KP8_CHAINC_NTLS20_BMEAN
Analysis of TLS Group 20 Chain Segments (overall rmsd_b=2.94 and residual=0.73)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue2-1817126 41.9 7.771.00 4.72 36.9 0.00, 21.62, 0.00 41.90.84
green19-5335248 40.212.351.00 3.77 31.1 8.87, 0.00, 4.93 40.20.72
magenta54-7825195 43.2 8.501.00 3.81 31.425.48, 3.70, 0.00 43.20.83
red79-11739264 40.6 9.821.00 3.39 29.810.49, 5.64, 0.00 40.60.78
cyan118-13518132 50.811.271.00 4.09 30.437.18, 4.69, 0.00 50.80.77
yellow136-15116108 75.6 7.201.00 3.67 70.820.42, 0.00, 0.00 75.60.90
violet152-17726185 92.3 6.141.00 3.84 86.010.22, 1.17, 0.00 92.30.94
purpleblue178-20225193109.2 5.211.00 2.70102.6 6.77, 0.00, 0.82109.20.95
salmon203-22624192128.0 3.311.00 1.49123.9 4.35, 0.00, 0.93128.00.97
lime227-27347347137.7 8.571.00 4.47109.0 2.19, 0.00, 0.00137.70.93
slate274-29926184115.6 4.561.00 2.13111.7 0.00, 10.82, 0.00115.60.96
bluegreen300-34849365127.6 9.531.00 2.55 97.0 5.38, 0.00, 1.07127.60.91
hotpink349-36416138139.2 4.101.00 1.44138.7 0.00, 0.00, 0.00139.20.96
orange365-38925176103.511.081.00 2.76 91.5 6.87, 0.00, 1.10103.50.90
yellowgreen390-40819148 76.913.371.00 3.19 53.824.05, 3.63, 0.00 76.90.83
blueviolet409-4231595 42.6 4.831.00 1.59 21.5 6.59, 0.00, 1.17 42.60.88
marine424-44421154 44.2 8.491.00 2.53 33.5 1.29, 13.52, 9.65 44.20.82
olive445-48238276 44.5 9.191.00 3.54-10.913.13, 0.99, 0.00 44.50.80
purple483-51331230 42.9 8.671.00 3.30 35.4 7.55, 0.00, 0.50 42.90.79
teal514-5261399 46.316.861.00 3.21 29.127.63, 10.36, 0.00 46.30.66

30 Mar 2010JobID: TLSMD7784_zxWfiZTDTLSMD Version 1.4.1 Released 11 February 2010