26 Mar 2010JobID: TLSMD7766_HvlAdtJqTLSMD Version 1.4.1

1DVJ: Chain B TLS Analysis


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Chain B Optimization Residual
1DVJ_CHAINB_RESID

TLSMD selects the optimal partition of a chain into 1 to 20 TLS groups by minimizing an overall residual function. This plot shows the value of the residual as a function of the number of TLS groups allowed in the partition. Adding additional TLS groups will always make this residual lower, but there is an issue of diminishing returns as you go to larger numbers of groups. The individual TLS segments are analyzed below.

TLS Partition Segment Alignment of Chain B

# of TLS
Groups
Segment/Sequence Alignment

Sequence Alignment Plot

This plot shows the location along the protein sequence of the optimal TLS group segments, and how those segments align with the optimal TLS group segments as the number of TLS groups used increases.


Summary of Optimal TLS Group Partition using 1 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
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structimageClick on image for expanded view
1DVJ_CHAINB_NTLS1_BMEAN
Analysis of TLS Group 1 Chain Segments (overall rmsd_b=3.82 and residual=0.49)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-2242111610 21.7 8.331.00 3.82 10.2 3.81, 0.72, 2.21 21.70.67


Summary of Optimal TLS Group Partition using 2 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS2_BMEAN
Analysis of TLS Group 2 Chain Segments (overall rmsd_b=3.40 and residual=0.39)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-139126984 18.8 6.561.00 3.58 9.8 0.19, 3.36, 4.05 18.80.72
green140-22485626 26.2 8.791.00 3.09 10.7 6.52, 0.00, 2.44 26.20.68


Summary of Optimal TLS Group Partition using 3 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS3_BMEAN
Analysis of TLS Group 3 Chain Segments (overall rmsd_b=3.13 and residual=0.33)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3522176 22.2 7.031.00 2.24 12.5 0.00, 11.41, 7.60 22.20.70
green36-139104808 18.1 6.211.00 3.33 10.5 0.00, 2.84, 4.76 18.10.73
magenta140-22485626 26.2 8.791.00 3.09 10.7 6.52, 0.00, 2.44 26.20.68


Summary of Optimal TLS Group Partition using 4 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS4_BMEAN
Analysis of TLS Group 4 Chain Segments (overall rmsd_b=2.89 and residual=0.28)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-5239309 21.4 7.711.00 2.62 11.7 0.00, 6.02, 7.08 21.40.64
green53-8634276 17.5 6.161.00 2.85 8.914.33, 0.00, 3.32 17.50.68
magenta87-13852394 17.7 5.151.00 2.92 11.3 0.00, 5.84, 3.12 17.70.74
red139-22486631 26.2 8.761.00 3.09 10.5 6.46, 0.00, 2.45 26.20.68


Summary of Optimal TLS Group Partition using 5 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS5_BMEAN
Analysis of TLS Group 5 Chain Segments (overall rmsd_b=2.71 and residual=0.25)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-5239309 21.4 7.711.00 2.62 11.7 0.00, 6.02, 7.08 21.40.64
green53-8634276 17.5 6.161.00 2.85 8.914.33, 0.00, 3.32 17.50.68
magenta87-13852394 17.7 5.151.00 2.92 11.3 0.00, 5.84, 3.12 17.70.74
red139-20163469 25.5 7.101.00 2.83 9.8 0.49, 4.13, 5.29 25.50.72
cyan202-22423162 28.112.171.00 2.31 12.9 0.00, 5.87, 6.22 28.10.59


Summary of Optimal TLS Group Partition using 6 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS6_BMEAN
Analysis of TLS Group 6 Chain Segments (overall rmsd_b=2.56 and residual=0.22)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3724197 23.6 7.891.00 2.37 12.2 0.00, 11.55, 7.35 23.60.67
green38-6326211 18.4 5.511.00 2.49 10.9 0.00, 11.72, 5.74 18.40.72
magenta64-10037290 15.5 5.221.00 2.49 9.711.72, 0.00, 1.95 15.50.72
red101-11919137 18.3 5.891.00 1.99 12.728.43, 0.00, 1.98 18.30.71
cyan120-21394700 23.5 6.961.00 2.93 14.2 0.00, 2.43, 3.37 23.50.71
yellow214-2241175 39.1 9.031.00 1.74 -0.632.01, 2.97, 0.00 39.10.75


Summary of Optimal TLS Group Partition using 7 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS7_BMEAN
Analysis of TLS Group 7 Chain Segments (overall rmsd_b=2.40 and residual=0.20)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3724197 23.6 7.891.00 2.37 12.2 0.00, 11.55, 7.35 23.60.67
green38-6326211 18.4 5.511.00 2.49 10.9 0.00, 11.72, 5.74 18.40.72
magenta64-10037290 15.5 5.221.00 2.49 9.711.72, 0.00, 1.95 15.50.72
red101-11919137 18.3 5.891.00 1.99 12.728.43, 0.00, 1.98 18.30.71
cyan120-14021157 20.1 4.751.00 2.44 17.3 3.68, 0.28, 0.00 20.10.78
yellow141-18646346 24.8 6.791.00 2.56 14.2 8.40, 2.98, 0.56 24.80.73
violet187-22438272 28.010.631.00 2.81 25.2 0.00, 7.71, 0.00 28.00.61


Summary of Optimal TLS Group Partition using 8 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS8_BMEAN
Analysis of TLS Group 8 Chain Segments (overall rmsd_b=2.24 and residual=0.17)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3724197 23.6 7.891.00 2.37 12.2 0.00, 11.55, 7.35 23.60.67
green38-6326211 18.4 5.511.00 2.49 10.9 0.00, 11.72, 5.74 18.40.72
magenta64-10037290 15.5 5.221.00 2.49 9.711.72, 0.00, 1.95 15.50.72
red101-11919137 18.3 5.891.00 1.99 12.728.43, 0.00, 1.98 18.30.71
cyan120-14021157 20.1 4.751.00 2.44 17.3 3.68, 0.28, 0.00 20.10.78
yellow141-18141317 25.0 7.031.00 2.57 13.8 8.15, 3.35, 0.40 25.00.71
violet182-20827193 23.9 7.861.00 2.14 15.4 9.71, 0.74, 0.00 23.90.66
purpleblue209-22416108 34.110.741.00 1.93 17.828.32, 5.22, 0.00 34.10.68


Summary of Optimal TLS Group Partition using 9 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS9_BMEAN
Analysis of TLS Group 9 Chain Segments (overall rmsd_b=2.11 and residual=0.15)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3724197 23.6 7.891.00 2.37 12.2 0.00, 11.55, 7.35 23.60.67
green38-6326211 18.4 5.511.00 2.49 10.9 0.00, 11.72, 5.74 18.40.72
magenta64-10037290 15.5 5.221.00 2.49 9.711.72, 0.00, 1.95 15.50.72
red101-11919137 18.3 5.891.00 1.99 12.728.43, 0.00, 1.98 18.30.71
cyan120-13819144 19.7 4.681.00 2.48 14.4 3.60, 1.45, 0.00 19.70.78
yellow139-16123170 22.5 5.331.00 2.06 14.812.26, 0.00, 5.98 22.50.76
violet162-18928208 27.6 7.211.00 2.48 17.110.87, 0.00, 4.32 27.60.74
purpleblue190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
salmon218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 10 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS10_BMEAN
Analysis of TLS Group 10 Chain Segments (overall rmsd_b=1.98 and residual=0.13)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5117140 21.7 9.401.00 1.99 13.9 0.00, 6.05, 5.24 21.70.59
magenta52-6514113 19.6 5.211.00 1.78 12.927.53, 0.00, 4.39 19.60.75
red66-10035280 15.3 5.111.00 2.50 9.911.87, 0.00, 1.50 15.30.72
cyan101-11919137 18.3 5.891.00 1.99 12.728.43, 0.00, 1.98 18.30.71
yellow120-13819144 19.7 4.681.00 2.48 14.4 3.60, 1.45, 0.00 19.70.78
violet139-16123170 22.5 5.331.00 2.06 14.812.26, 0.00, 5.98 22.50.76
purpleblue162-18928208 27.6 7.211.00 2.48 17.110.87, 0.00, 4.32 27.60.74
salmon190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
lime218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 11 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS11_BMEAN
Analysis of TLS Group 11 Chain Segments (overall rmsd_b=1.89 and residual=0.12)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5218144 21.5 9.341.00 2.05 14.0 0.00, 4.78, 6.01 21.50.59
magenta53-7422181 18.0 5.761.00 2.60 9.814.39, 0.00, 3.80 18.00.70
red75-861295 16.3 6.721.00 1.84 11.832.34, 2.54, 0.00 16.30.64
cyan87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
yellow107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
violet120-13819144 19.7 4.681.00 2.48 14.4 3.60, 1.45, 0.00 19.70.78
purpleblue139-16123170 22.5 5.331.00 2.06 14.812.26, 0.00, 5.98 22.50.76
salmon162-18928208 27.6 7.211.00 2.48 17.110.87, 0.00, 4.32 27.60.74
lime190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
slate218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 12 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS12_BMEAN
Analysis of TLS Group 12 Chain Segments (overall rmsd_b=1.79 and residual=0.11)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5117140 21.7 9.401.00 1.99 13.9 0.00, 6.05, 5.24 21.70.59
magenta52-6413107 19.5 5.301.00 1.67 13.028.13, 0.00, 4.64 19.50.75
red65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
cyan76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
yellow87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
violet107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
purpleblue120-13819144 19.7 4.681.00 2.48 14.4 3.60, 1.45, 0.00 19.70.78
salmon139-16123170 22.5 5.331.00 2.06 14.812.26, 0.00, 5.98 22.50.76
lime162-18928208 27.6 7.211.00 2.48 17.110.87, 0.00, 4.32 27.60.74
slate190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
bluegreen218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 13 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS13_BMEAN
Analysis of TLS Group 13 Chain Segments (overall rmsd_b=1.71 and residual=0.10)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5117140 21.7 9.401.00 1.99 13.9 0.00, 6.05, 5.24 21.70.59
magenta52-6413107 19.5 5.301.00 1.67 13.028.13, 0.00, 4.64 19.50.75
red65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
cyan76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
yellow87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
violet107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
purpleblue120-13819144 19.7 4.681.00 2.48 14.4 3.60, 1.45, 0.00 19.70.78
salmon139-16123170 22.5 5.331.00 2.06 14.812.26, 0.00, 5.98 22.50.76
lime162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
slate169-18921144 26.1 7.471.00 1.90 19.211.67, 0.00, 3.40 26.10.71
bluegreen190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
hotpink218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 14 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS14_BMEAN
Analysis of TLS Group 14 Chain Segments (overall rmsd_b=1.62 and residual=0.09)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5117140 21.7 9.401.00 1.99 13.9 0.00, 6.05, 5.24 21.70.59
magenta52-6413107 19.5 5.301.00 1.67 13.028.13, 0.00, 4.64 19.50.75
red65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
cyan76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
yellow87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
violet107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
purpleblue120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
salmon132-14716119 23.3 4.921.00 1.85 18.621.92, 2.29, 0.00 23.30.80
lime148-1601398 21.2 5.181.00 1.87 14.716.45, 0.00, 4.78 21.20.76
slate161-1711196 30.5 5.411.00 2.32 25.915.09, 4.71, 0.00 30.50.81
bluegreen172-18918119 25.4 7.471.00 1.82 17.116.20, 0.00, 4.49 25.40.70
hotpink190-21728197 23.1 7.061.00 1.65 16.3 6.92, 2.03, 0.00 23.10.68
orange218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 15 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS15_BMEAN
Analysis of TLS Group 15 Chain Segments (overall rmsd_b=1.56 and residual=0.08)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-5117140 21.7 9.401.00 1.99 13.9 0.00, 6.05, 5.24 21.70.59
magenta52-6413107 19.5 5.301.00 1.67 13.028.13, 0.00, 4.64 19.50.75
red65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
cyan76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
yellow87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
violet107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
purpleblue120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
salmon132-14716119 23.3 4.921.00 1.85 18.621.92, 2.29, 0.00 23.30.80
lime148-16114105 21.8 5.451.00 1.84 14.816.13, 0.00, 4.91 21.80.75
slate162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
bluegreen169-18416112 24.8 7.401.00 1.47 18.510.54, 3.09, 0.00 24.80.70
hotpink185-193960 31.2 5.841.00 2.04 29.415.24, 0.00, 0.00 31.20.79
orange194-21320150 20.9 6.051.00 1.24 14.8 0.00, 5.50, 3.14 20.90.72
yellowgreen214-2241175 39.1 9.031.00 1.74 -0.632.01, 2.97, 0.00 39.10.75


Summary of Optimal TLS Group Partition using 16 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS16_BMEAN
Analysis of TLS Group 16 Chain Segments (overall rmsd_b=1.50 and residual=0.08)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-38440 34.8 4.681.00 1.29 30.316.44, 0.00, 6.34 34.80.88
magenta39-5315112 16.4 4.211.00 1.33 12.4 0.00, 3.78, 6.51 16.40.77
red54-641195 20.0 5.401.00 1.59 13.328.04, 0.00, 6.37 20.00.75
cyan65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
yellow76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
violet87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
purpleblue107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
salmon120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
lime132-14716119 23.3 4.921.00 1.85 18.621.92, 2.29, 0.00 23.30.80
slate148-16114105 21.8 5.451.00 1.84 14.816.13, 0.00, 4.91 21.80.75
bluegreen162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
hotpink169-18416112 24.8 7.401.00 1.47 18.510.54, 3.09, 0.00 24.80.70
orange185-193960 31.2 5.841.00 2.04 29.415.24, 0.00, 0.00 31.20.79
yellowgreen194-21320150 20.9 6.051.00 1.24 14.8 0.00, 5.50, 3.14 20.90.72
blueviolet214-2241175 39.1 9.031.00 1.74 -0.632.01, 2.97, 0.00 39.10.75


Summary of Optimal TLS Group Partition using 17 Groups
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structimageClick on image for expanded view
1DVJ_CHAINB_NTLS17_BMEAN
Analysis of TLS Group 17 Chain Segments (overall rmsd_b=1.45 and residual=0.07)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-3421165 21.2 5.921.00 1.71 13.0 0.00, 8.68, 7.46 21.20.72
green35-38440 34.8 4.681.00 1.29 30.316.44, 0.00, 6.34 34.80.88
magenta39-5315112 16.4 4.211.00 1.33 12.4 0.00, 3.78, 6.51 16.40.77
red54-641195 20.0 5.401.00 1.59 13.328.04, 0.00, 6.37 20.00.75
cyan65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
yellow76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
violet87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
purpleblue107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
salmon120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
lime132-136545 23.2 5.311.00 1.42 18.3 0.00, 10.13, 23.53 23.20.77
slate137-1491390 23.8 4.761.00 1.48 19.928.98, 3.93, 0.00 23.80.80
bluegreen150-1611289 21.1 5.281.00 1.76 14.818.46, 0.00, 4.12 21.10.75
hotpink162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
orange169-18416112 24.8 7.401.00 1.47 18.510.54, 3.09, 0.00 24.80.70
yellowgreen185-193960 31.2 5.841.00 2.04 29.415.24, 0.00, 0.00 31.20.79
blueviolet194-21320150 20.9 6.051.00 1.24 14.8 0.00, 5.50, 3.14 20.90.72
marine214-2241175 39.1 9.031.00 1.74 -0.632.01, 2.97, 0.00 39.10.75


Summary of Optimal TLS Group Partition using 18 Groups
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structimageClick on image for expanded view
1DVJ_CHAINB_NTLS18_BMEAN
Analysis of TLS Group 18 Chain Segments (overall rmsd_b=1.39 and residual=0.07)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-18540 21.0 8.091.00 0.80 14.0 0.00, 13.43, 9.60 21.00.67
green19-3416125 21.3 5.031.00 1.35 14.5 0.00, 13.80, 8.03 21.30.76
magenta35-38440 34.8 4.681.00 1.29 30.316.44, 0.00, 6.34 34.80.88
red39-5315112 16.4 4.211.00 1.33 12.4 0.00, 3.78, 6.51 16.40.77
cyan54-641195 20.0 5.401.00 1.59 13.328.04, 0.00, 6.37 20.00.75
yellow65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
violet76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
purpleblue87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
salmon107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
lime120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
slate132-136545 23.2 5.311.00 1.42 18.3 0.00, 10.13, 23.53 23.20.77
bluegreen137-1491390 23.8 4.761.00 1.48 19.928.98, 3.93, 0.00 23.80.80
hotpink150-1611289 21.1 5.281.00 1.76 14.818.46, 0.00, 4.12 21.10.75
orange162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
yellowgreen169-18416112 24.8 7.401.00 1.47 18.510.54, 3.09, 0.00 24.80.70
blueviolet185-193960 31.2 5.841.00 2.04 29.415.24, 0.00, 0.00 31.20.79
marine194-21320150 20.9 6.051.00 1.24 14.8 0.00, 5.50, 3.14 20.90.72
olive214-2241175 39.1 9.031.00 1.74 -0.632.01, 2.97, 0.00 39.10.75


Summary of Optimal TLS Group Partition using 19 Groups
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structimageClick on image for expanded view
1DVJ_CHAINB_NTLS19_BMEAN
Analysis of TLS Group 19 Chain Segments (overall rmsd_b=1.34 and residual=0.06)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-18540 21.0 8.091.00 0.80 14.0 0.00, 13.43, 9.60 21.00.67
green19-3416125 21.3 5.031.00 1.35 14.5 0.00, 13.80, 8.03 21.30.76
magenta35-38440 34.8 4.681.00 1.29 30.316.44, 0.00, 6.34 34.80.88
red39-5315112 16.4 4.211.00 1.33 12.4 0.00, 3.78, 6.51 16.40.77
cyan54-641195 20.0 5.401.00 1.59 13.328.04, 0.00, 6.37 20.00.75
yellow65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
violet76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
purpleblue87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
salmon107-11913100 19.3 6.571.00 1.81 12.428.59, 0.00, 5.14 19.30.69
lime120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
slate132-136545 23.2 5.311.00 1.42 18.3 0.00, 10.13, 23.53 23.20.77
bluegreen137-1491390 23.8 4.761.00 1.48 19.928.98, 3.93, 0.00 23.80.80
hotpink150-1611289 21.1 5.281.00 1.76 14.818.46, 0.00, 4.12 21.10.75
orange162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
yellowgreen169-18214103 25.0 7.661.00 1.48 17.911.24, 3.21, 0.00 25.00.70
blueviolet183-189741 28.7 6.261.00 1.49 20.4 0.00, 10.46, 6.41 28.70.77
marine190-2021395 25.9 7.911.00 0.96-21.914.88, 0.00, 0.55 25.90.68
olive203-21715102 20.5 4.911.00 1.12 14.011.62, 4.99, 0.00 20.50.75
purple218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82


Summary of Optimal TLS Group Partition using 20 Groups
Full TLS Partition Analysis    View with Jmol    Animate Screw Displacement with Jmol
Download TLSOUT File for TLSView    Group description for PHENIX    Generate PDBIN/TLSIN Files for REFMAC5/PHENIX
structimageClick on image for expanded view
1DVJ_CHAINB_NTLS20_BMEAN
Analysis of TLS Group 20 Chain Segments (overall rmsd_b=1.30 and residual=0.06)
Input StructureTLS Predictions
ColorSegmentResiduesAtoms<B>Brmsd<Aniso>RMSD BTr Beval(L) DEG2<B><Aniso>
blue14-18540 21.0 8.091.00 0.80 14.0 0.00, 13.43, 9.60 21.00.67
green19-3416125 21.3 5.031.00 1.35 14.5 0.00, 13.80, 8.03 21.30.76
magenta35-38440 34.8 4.681.00 1.29 30.316.44, 0.00, 6.34 34.80.88
red39-5315112 16.4 4.211.00 1.33 12.4 0.00, 3.78, 6.51 16.40.77
cyan54-641195 20.0 5.401.00 1.59 13.328.04, 0.00, 6.37 20.00.75
yellow65-751186 15.6 5.451.00 1.75 10.316.64, 0.00, 4.05 15.60.70
violet76-861187 16.7 6.931.00 1.84 12.334.43, 2.62, 0.00 16.70.63
purpleblue87-10620150 14.6 2.181.00 1.54 11.9 0.00, 1.64, 5.38 14.60.88
salmon107-114859 19.7 7.081.00 1.48 14.637.84, 0.00, 3.95 19.70.69
lime115-119541 18.8 5.731.00 1.10 11.6 0.00, 11.80, 21.14 18.80.72
slate120-1311290 17.8 3.231.00 1.31 15.917.19, 0.00, 0.00 17.80.83
bluegreen132-136545 23.2 5.311.00 1.42 18.3 0.00, 10.13, 23.53 23.20.77
hotpink137-1491390 23.8 4.761.00 1.48 19.928.98, 3.93, 0.00 23.80.80
orange150-1611289 21.1 5.281.00 1.76 14.818.46, 0.00, 4.12 21.10.75
yellowgreen162-168764 31.0 5.191.00 1.84 23.319.52, 0.41, 6.26 31.00.82
blueviolet169-18214103 25.0 7.661.00 1.48 17.911.24, 3.21, 0.00 25.00.70
marine183-189741 28.7 6.261.00 1.49 20.4 0.00, 10.46, 6.41 28.70.77
olive190-2021395 25.9 7.911.00 0.96-21.914.88, 0.00, 0.55 25.90.68
purple203-21715102 20.5 4.911.00 1.12 14.011.62, 4.99, 0.00 20.50.75
teal218-224756 42.9 6.861.00 1.43 40.1 0.00, 31.32, 0.00 42.90.82

26 Mar 2010JobID: TLSMD7766_HvlAdtJqTLSMD Version 1.4.1 Released 11 February 2010