| Protein Data Bank | General Tools | |||
| Molecules'R'Us PDB
acces Peter FitzGerald's user-friendly search and retrieval from PDB database |
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| PDB at Brookhaven (being replaced by RCSB) |
 Entrez Browser
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| RCSB | Genome Database | |||
| SDSC MOOSE interface to PDB data | Sanger Center | |||
| NCBI human genome map-site | ||||
| Sequence Databases | Secondary Structure | |||
| PIR Protein Information Resource |
Genome Data Base
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CATH
Christine Orengo's scheme for identifying and classifying protein fold |
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| PEDANT
Protein Extraction, Description, and ANalysis Tool |
SCOP Collection +
[US mirror site] (Structural Classification of Proteins) |
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| OWL server sequence searches | PredictProtein
EMBL automatic service for predicting aspects of protein structure |
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| BLOCKS Fred Hutchinson Cancer Research Center tools for verifying protein sequence homology |
secondary structure prediction using a logistic discriminant function (NIH Laboratory of Structural Biology) |
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PROMOTIF Gail Hutchinson's tools for analysing protein structural motifs |
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| NDB (Nucleic Acid Database) | DALI Protein comparison by alignment of distance matrices (Holm & Sander, 1993) |
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| ProClass Database organized by family relationships (ProSite/PIR) |
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| PROSPECT threading-based protein structure prediction system | ||||
| Interpro combined search of sequence and motif databases | ||||
| Other | ||||
| OCA browser-database for structure/function | ||||
| EC Enzyme database | ExPASy Molecular Biology Server | |||
| PUMA
database of metabolic pathways cross-referenced by phylogeny, sequence, and function |
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| CCDC (Cambridge Crystallographic
Data Centre) This contains information relating to the Cambridge Structural Database (CSD) and associated software |
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imb Image Library VRML and other images of macromolecular structures |
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